Cluster: CGMR093085_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_42758 | k141_42758_72 | 89365 | 90348 | - | GT8 |
| CAZyme | k141_42758 | k141_42758_73 | 90370 | 91395 | - | GT2 |
| CAZyme | k141_42758 | k141_42758_74 | 91395 | 92366 | - | GT9 |
| pfam | k141_42758 | k141_42758_75 | 92388 | 93419 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | k141_42758 | k141_42758_76 | 93678 | 94832 | + | GT2 |
| NULL(UNKNOWN) | k141_42758 | k141_42758_77 | 94859 | 95668 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_42758 | k141_42758_78 | 95949 | 97118 | + | GT4 |
| CAZyme | k141_42758 | k141_42758_79 | 97241 | 98239 | + | GT10 |
| TC | k141_42758 | k141_42758_80 | 98336 | 100417 | + | 9.B.97.5.1 |
| CAZyme | k141_42758 | k141_42758_81 | 100574 | 101599 | + | GT10 |
| NULL(UNKNOWN) | k141_42758 | k141_42758_82 | 101636 | 102151 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_42758 | k141_42758_83 | 102234 | 102467 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_42758 | k141_42758_84 | 102594 | 104459 | - | 2.A.47.4.8 |
Gene ID: k141_42758_72
Type: CAZyme
Location: 89365 - 90348 (-)
Type: CAZyme
Location: 89365 - 90348 (-)
Gene ID: k141_42758_73
Type: CAZyme
Location: 90370 - 91395 (-)
Type: CAZyme
Location: 90370 - 91395 (-)
Gene ID: k141_42758_74
Type: CAZyme
Location: 91395 - 92366 (-)
Type: CAZyme
Location: 91395 - 92366 (-)
Gene ID: k141_42758_75
Type: pfam
Location: 92388 - 93419 (-)
Type: pfam
Location: 92388 - 93419 (-)
Gene ID: k141_42758_76
Type: CAZyme
Location: 93678 - 94832 (+)
Type: CAZyme
Location: 93678 - 94832 (+)
Gene ID: k141_42758_77
Type:
Location: 94859 - 95668 (+)
Type:
Location: 94859 - 95668 (+)
Gene ID: k141_42758_78
Type: CAZyme
Location: 95949 - 97118 (+)
Type: CAZyme
Location: 95949 - 97118 (+)
Gene ID: k141_42758_79
Type: CAZyme
Location: 97241 - 98239 (+)
Type: CAZyme
Location: 97241 - 98239 (+)
Gene ID: k141_42758_80
Type: TC
Location: 98336 - 100417 (+)
Type: TC
Location: 98336 - 100417 (+)
Gene ID: k141_42758_81
Type: CAZyme
Location: 100574 - 101599 (+)
Type: CAZyme
Location: 100574 - 101599 (+)
Gene ID: k141_42758_82
Type:
Location: 101636 - 102151 (-)
Type:
Location: 101636 - 102151 (-)
Gene ID: k141_42758_83
Type:
Location: 102234 - 102467 (-)
Type:
Location: 102234 - 102467 (-)
Gene ID: k141_42758_84
Type: TC
Location: 102594 - 104459 (-)
Type: TC
Location: 102594 - 104459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_42758_83 | vegetarian > vegan | 1.16044 | 0.00855 |