Cluster: CGMR093085_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_42758 | k141_42758_30 | 42329 | 43570 | - | 2.A.3.6.4 |
| pfam | k141_42758 | k141_42758_31 | 43786 | 44487 | + | Hydrolase | HAD | HAD_2 |
| TC | k141_42758 | k141_42758_32 | 44547 | 45659 | + | 2.A.86.1.4 |
| pfam | k141_42758 | k141_42758_33 | 45663 | 46952 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | k141_42758 | k141_42758_34 | 47122 | 48774 | + | GH20 |
Gene ID: k141_42758_30
Type: TC
Location: 42329 - 43570 (-)
Type: TC
Location: 42329 - 43570 (-)
Gene ID: k141_42758_31
Type: pfam
Location: 43786 - 44487 (+)
Type: pfam
Location: 43786 - 44487 (+)
Gene ID: k141_42758_32
Type: TC
Location: 44547 - 45659 (+)
Type: TC
Location: 44547 - 45659 (+)
Gene ID: k141_42758_33
Type: pfam
Location: 45663 - 46952 (+)
Type: pfam
Location: 45663 - 46952 (+)
Gene ID: k141_42758_34
Type: CAZyme
Location: 47122 - 48774 (+)
Type: CAZyme
Location: 47122 - 48774 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_42758_31 | vegetarian > omnivore | 1.33978 | 0.01615 |