Cluster: CGMR093085_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_63862 | k141_63862_156 | 198303 | 201266 | - | CBM32 | GH2 |
| pfam | k141_63862 | k141_63862_157 | 201573 | 202691 | - | Rotamase | Rotamase_2 | Rotamase_3 | SurA_N_2 | SurA_N_3 |
| pfam | k141_63862 | k141_63862_158 | 202868 | 203593 | + | UbiA |
| TC | k141_63862 | k141_63862_159 | 203649 | 204299 | + | 1.A.30.3.3 |
Gene ID: k141_63862_156
Type: CAZyme
Location: 198303 - 201266 (-)
Type: CAZyme
Location: 198303 - 201266 (-)
Gene ID: k141_63862_157
Type: pfam
Location: 201573 - 202691 (-)
Type: pfam
Location: 201573 - 202691 (-)
Gene ID: k141_63862_158
Type: pfam
Location: 202868 - 203593 (+)
Type: pfam
Location: 202868 - 203593 (+)
Gene ID: k141_63862_159
Type: TC
Location: 203649 - 204299 (+)
Type: TC
Location: 203649 - 204299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.