Cluster: CGMR093085_CGC35
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56629 | k141_56629_174 | 211495 | 212967 | + | 2.A.114.1.4 |
| pfam | k141_56629 | k141_56629_175 | 212972 | 214315 | + | MFS_1 |
| TC | k141_56629 | k141_56629_176 | 214472 | 215065 | + | 3.D.1.8.1 |
| NULL(UNKNOWN) | k141_56629 | k141_56629_177 | 215092 | 215406 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_56629 | k141_56629_178 | 215403 | 216551 | + | CE9 |
| pfam | k141_56629 | k141_56629_179 | 216637 | 217677 | + | Biotin_lipoyl | E3_binding |
| peptidase | k141_56629 | k141_56629_180 | 217741 | 218304 | + | C56.UNW |
| CAZyme | k141_56629 | k141_56629_181 | 218399 | 219475 | - | GT2 |
| CAZyme | k141_56629 | k141_56629_182 | 219472 | 220557 | - | GT2 |
| CAZyme | k141_56629 | k141_56629_183 | 220720 | 221814 | - | GT2 |
| CAZyme | k141_56629 | k141_56629_184 | 221821 | 222921 | - | GT2 |
| CAZyme | k141_56629 | k141_56629_185 | 223267 | 224328 | + | GT8 |
| CAZyme | k141_56629 | k141_56629_186 | 224343 | 225449 | + | GT8 |
Gene ID: k141_56629_174
Type: TC
Location: 211495 - 212967 (+)
Type: TC
Location: 211495 - 212967 (+)
Gene ID: k141_56629_175
Type: pfam
Location: 212972 - 214315 (+)
Type: pfam
Location: 212972 - 214315 (+)
Gene ID: k141_56629_176
Type: TC
Location: 214472 - 215065 (+)
Type: TC
Location: 214472 - 215065 (+)
Gene ID: k141_56629_177
Type:
Location: 215092 - 215406 (+)
Type:
Location: 215092 - 215406 (+)
Gene ID: k141_56629_178
Type: CAZyme
Location: 215403 - 216551 (+)
Type: CAZyme
Location: 215403 - 216551 (+)
Gene ID: k141_56629_179
Type: pfam
Location: 216637 - 217677 (+)
Type: pfam
Location: 216637 - 217677 (+)
Gene ID: k141_56629_180
Type: peptidase
Location: 217741 - 218304 (+)
Type: peptidase
Location: 217741 - 218304 (+)
Gene ID: k141_56629_181
Type: CAZyme
Location: 218399 - 219475 (-)
Type: CAZyme
Location: 218399 - 219475 (-)
Gene ID: k141_56629_182
Type: CAZyme
Location: 219472 - 220557 (-)
Type: CAZyme
Location: 219472 - 220557 (-)
Gene ID: k141_56629_183
Type: CAZyme
Location: 220720 - 221814 (-)
Type: CAZyme
Location: 220720 - 221814 (-)
Gene ID: k141_56629_184
Type: CAZyme
Location: 221821 - 222921 (-)
Type: CAZyme
Location: 221821 - 222921 (-)
Gene ID: k141_56629_185
Type: CAZyme
Location: 223267 - 224328 (+)
Type: CAZyme
Location: 223267 - 224328 (+)
Gene ID: k141_56629_186
Type: CAZyme
Location: 224343 - 225449 (+)
Type: CAZyme
Location: 224343 - 225449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.