Cluster: CGMR093085_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_56629 | k141_56629_93 | 115189 | 116745 | + | GH20 |
| pfam | k141_56629 | k141_56629_94 | 116868 | 118283 | + | tRNA-synt_1e | DALR_2 | CysS_C |
| STP | k141_56629 | k141_56629_95 | 118290 | 118634 | + | AraC_binding |
| TC | k141_56629 | k141_56629_96 | 118631 | 119566 | + | 2.A.7.3.36 |
| pfam | k141_56629 | k141_56629_97 | 119963 | 120613 | + | PEP-CTERM |
| TC | k141_56629 | k141_56629_98 | 120705 | 122699 | - | 3.A.1.121.4 |
| TC | k141_56629 | k141_56629_99 | 122784 | 123287 | - | 3.D.1.8.1 |
Gene ID: k141_56629_93
Type: CAZyme
Location: 115189 - 116745 (+)
Type: CAZyme
Location: 115189 - 116745 (+)
Gene ID: k141_56629_94
Type: pfam
Location: 116868 - 118283 (+)
Type: pfam
Location: 116868 - 118283 (+)
Gene ID: k141_56629_95
Type: STP
Location: 118290 - 118634 (+)
Type: STP
Location: 118290 - 118634 (+)
Gene ID: k141_56629_96
Type: TC
Location: 118631 - 119566 (+)
Type: TC
Location: 118631 - 119566 (+)
Gene ID: k141_56629_97
Type: pfam
Location: 119963 - 120613 (+)
Type: pfam
Location: 119963 - 120613 (+)
Gene ID: k141_56629_98
Type: TC
Location: 120705 - 122699 (-)
Type: TC
Location: 120705 - 122699 (-)
Gene ID: k141_56629_99
Type: TC
Location: 122784 - 123287 (-)
Type: TC
Location: 122784 - 123287 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_56629_95 | vegetarian > omnivore | 1.36599 | 0.03393 |