dbCAN Logo

Cluster: CGMR093085_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48985 k141_48985_68 83676 85058 - 3.D.1.5.1
TC k141_48985 k141_48985_69 85106 86530 - 3.D.1.5.1
TC k141_48985 k141_48985_70 86552 88384 - 3.D.1.3.1
TC k141_48985 k141_48985_71 88408 88725 - 3.D.1.3.1
TC k141_48985 k141_48985_72 88752 89552 - 3.D.1.1.1
STP k141_48985 k141_48985_73 89589 90152 - Fer4 | Fer4
TC k141_48985 k141_48985_74 90180 91448 - 3.D.1.5.1
TC k141_48985 k141_48985_75 91484 93220 - 3.D.1.6.3
TC k141_48985 k141_48985_76 93272 94672 - 3.D.1.3.1
TC k141_48985 k141_48985_77 94702 95280 - 3.D.1.3.1
TC k141_48985 k141_48985_78 95330 96574 - 3.D.1.5.1
CAZyme k141_48985 k141_48985_79 97013 98479 - CE4
TC k141_48985 k141_48985_80 98672 100285 + 2.A.111.2.1
pfam k141_48985 k141_48985_81 100310 100912 + Lum_binding | Lum_binding
pfam k141_48985 k141_48985_82 101054 101914 - MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
CAZyme k141_48985 k141_48985_83 102073 103932 - GH77
NULL(UNKNOWN) k141_48985 k141_48985_84 104225 104842 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_48985 k141_48985_85 104948 106306 - UPF0004 | Radical_SAM | TRAM_2
TC k141_48985 k141_48985_86 106333 107769 - 8.A.21.2.1
Gene ID: k141_48985_68
Type: TC
Location: 83676 - 85058 (-)
Gene ID: k141_48985_69
Type: TC
Location: 85106 - 86530 (-)
Gene ID: k141_48985_70
Type: TC
Location: 86552 - 88384 (-)
Gene ID: k141_48985_71
Type: TC
Location: 88408 - 88725 (-)
Gene ID: k141_48985_72
Type: TC
Location: 88752 - 89552 (-)
Gene ID: k141_48985_73
Type: STP
Location: 89589 - 90152 (-)
Gene ID: k141_48985_74
Type: TC
Location: 90180 - 91448 (-)
Gene ID: k141_48985_75
Type: TC
Location: 91484 - 93220 (-)
Gene ID: k141_48985_76
Type: TC
Location: 93272 - 94672 (-)
Gene ID: k141_48985_77
Type: TC
Location: 94702 - 95280 (-)
Gene ID: k141_48985_78
Type: TC
Location: 95330 - 96574 (-)
Gene ID: k141_48985_79
Type: CAZyme
Location: 97013 - 98479 (-)
Gene ID: k141_48985_80
Type: TC
Location: 98672 - 100285 (+)
Gene ID: k141_48985_81
Type: pfam
Location: 100310 - 100912 (+)
Gene ID: k141_48985_82
Type: pfam
Location: 101054 - 101914 (-)
Gene ID: k141_48985_83
Type: CAZyme
Location: 102073 - 103932 (-)
Gene ID: k141_48985_84
Type:
Location: 104225 - 104842 (+)
Gene ID: k141_48985_85
Type: pfam
Location: 104948 - 106306 (-)
Gene ID: k141_48985_86
Type: TC
Location: 106333 - 107769 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_48985_71 vegetarian > omnivore 1.11061 0.03393
k141_48985_82 vegetarian > omnivore 2.12723 0.03393
k141_48985_82 vegetarian > vegan 1.32619 0.00855

🧭 Explore Read Mapping of CGC

← Back to Cluster List