Cluster: CGMR093085_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_48985 | k141_48985_38 | 45422 | 46243 | - | GT2 |
| CAZyme | k141_48985 | k141_48985_39 | 46251 | 47195 | - | GT2 |
| pfam | k141_48985 | k141_48985_40 | 47331 | 47999 | - | N_methyl |
| TC | k141_48985 | k141_48985_41 | 48022 | 49290 | - | 3.A.11.1.3 |
| TC | k141_48985 | k141_48985_42 | 49357 | 51015 | - | 3.A.15.4.1 |
| TC | k141_48985 | k141_48985_43 | 51044 | 52690 | - | 3.A.15.4.1 |
Gene ID: k141_48985_38
Type: CAZyme
Location: 45422 - 46243 (-)
Type: CAZyme
Location: 45422 - 46243 (-)
Gene ID: k141_48985_39
Type: CAZyme
Location: 46251 - 47195 (-)
Type: CAZyme
Location: 46251 - 47195 (-)
Gene ID: k141_48985_40
Type: pfam
Location: 47331 - 47999 (-)
Type: pfam
Location: 47331 - 47999 (-)
Gene ID: k141_48985_41
Type: TC
Location: 48022 - 49290 (-)
Type: TC
Location: 48022 - 49290 (-)
Gene ID: k141_48985_42
Type: TC
Location: 49357 - 51015 (-)
Type: TC
Location: 49357 - 51015 (-)
Gene ID: k141_48985_43
Type: TC
Location: 51044 - 52690 (-)
Type: TC
Location: 51044 - 52690 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.