Cluster: CGMR093085_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46189 | k141_46189_24 | 29698 | 31596 | + | 2.A.9.3.7 |
| pfam | k141_46189 | k141_46189_25 | 32287 | 32796 | - | YgbB |
| pfam | k141_46189 | k141_46189_26 | 32817 | 33563 | - | Inositol_P |
| CAZyme | k141_46189 | k141_46189_27 | 33615 | 35405 | - | GT51 |
| STP | k141_46189 | k141_46189_28 | 35429 | 37828 | - | TPR_2 |
| pfam | k141_46189 | k141_46189_29 | 37858 | 38304 | - | ExbD |
| TC | k141_46189 | k141_46189_30 | 38341 | 39123 | - | 1.A.30.2.9 |
Gene ID: k141_46189_24
Type: TC
Location: 29698 - 31596 (+)
Type: TC
Location: 29698 - 31596 (+)
Gene ID: k141_46189_25
Type: pfam
Location: 32287 - 32796 (-)
Type: pfam
Location: 32287 - 32796 (-)
Gene ID: k141_46189_26
Type: pfam
Location: 32817 - 33563 (-)
Type: pfam
Location: 32817 - 33563 (-)
Gene ID: k141_46189_27
Type: CAZyme
Location: 33615 - 35405 (-)
Type: CAZyme
Location: 33615 - 35405 (-)
Gene ID: k141_46189_28
Type: STP
Location: 35429 - 37828 (-)
Type: STP
Location: 35429 - 37828 (-)
Gene ID: k141_46189_29
Type: pfam
Location: 37858 - 38304 (-)
Type: pfam
Location: 37858 - 38304 (-)
Gene ID: k141_46189_30
Type: TC
Location: 38341 - 39123 (-)
Type: TC
Location: 38341 - 39123 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_46189_26 | vegetarian > omnivore | 1.31662 | 0.03393 |