Cluster: CGMR092402_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR092402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2057 | k141_2057_303 | 305826 | 306752 | + | GT2 |
| NULL(UNKNOWN) | k141_2057 | k141_2057_304 | 306752 | 308380 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_2057 | k141_2057_305 | 308463 | 313463 | - | GT2 |
| TC | k141_2057 | k141_2057_306 | 313641 | 314456 | + | 3.A.1.104.1 |
| TC | k141_2057 | k141_2057_307 | 314472 | 315533 | + | 3.A.1.104.1 |
Gene ID: k141_2057_303
Type: CAZyme
Location: 305826 - 306752 (+)
Type: CAZyme
Location: 305826 - 306752 (+)
Gene ID: k141_2057_304
Type:
Location: 306752 - 308380 (+)
Type:
Location: 306752 - 308380 (+)
Gene ID: k141_2057_305
Type: CAZyme
Location: 308463 - 313463 (-)
Type: CAZyme
Location: 308463 - 313463 (-)
Gene ID: k141_2057_306
Type: TC
Location: 313641 - 314456 (+)
Type: TC
Location: 313641 - 314456 (+)
Gene ID: k141_2057_307
Type: TC
Location: 314472 - 315533 (+)
Type: TC
Location: 314472 - 315533 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus pentosaceus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.