Cluster: CGMR091553_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091553
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13880 | k141_13880_44 | 51301 | 52794 | - | 2.A.1.3.17 |
| TC | k141_13880 | k141_13880_45 | 53280 | 54761 | + | 3.A.1.120.3 |
| CAZyme | k141_13880 | k141_13880_46 | 54938 | 56293 | - | GH13_20 |
| pfam | k141_13880 | k141_13880_47 | 56567 | 57271 | + | DNA_alkylation |
| NULL(UNKNOWN) | k141_13880 | k141_13880_48 | 57414 | 58145 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_13880 | k141_13880_49 | 58446 | 59102 | - | 2.A.115.2.7 |
Gene ID: k141_13880_44
Type: TC
Location: 51301 - 52794 (-)
Type: TC
Location: 51301 - 52794 (-)
Gene ID: k141_13880_45
Type: TC
Location: 53280 - 54761 (+)
Type: TC
Location: 53280 - 54761 (+)
Gene ID: k141_13880_46
Type: CAZyme
Location: 54938 - 56293 (-)
Type: CAZyme
Location: 54938 - 56293 (-)
Gene ID: k141_13880_47
Type: pfam
Location: 56567 - 57271 (+)
Type: pfam
Location: 56567 - 57271 (+)
Gene ID: k141_13880_48
Type:
Location: 57414 - 58145 (-)
Type:
Location: 57414 - 58145 (-)
Gene ID: k141_13880_49
Type: TC
Location: 58446 - 59102 (-)
Type: TC
Location: 58446 - 59102 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.