Cluster: CGMR091553_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091553
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10463 | k141_10463_50 | 61765 | 62925 | - | CE9 |
| STP | k141_10463 | k141_10463_51 | 63011 | 64171 | - | SIS | SIS |
| TF | k141_10463 | k141_10463_52 | 64336 | 65067 | - | GntR |
| TC | k141_10463 | k141_10463_53 | 65236 | 66312 | - | 4.A.6.1.4 |
| TC | k141_10463 | k141_10463_54 | 66302 | 67099 | - | 4.A.6.1.4 |
| TC | k141_10463 | k141_10463_55 | 67189 | 67671 | - | 4.A.6.1.4 |
| pfam | k141_10463 | k141_10463_56 | 67788 | 68075 | - | YajC |
| TC | k141_10463 | k141_10463_57 | 68075 | 68515 | - | 4.A.6.1.8 |
Gene ID: k141_10463_50
Type: CAZyme
Location: 61765 - 62925 (-)
Type: CAZyme
Location: 61765 - 62925 (-)
Gene ID: k141_10463_51
Type: STP
Location: 63011 - 64171 (-)
Type: STP
Location: 63011 - 64171 (-)
Gene ID: k141_10463_52
Type: TF
Location: 64336 - 65067 (-)
Type: TF
Location: 64336 - 65067 (-)
Gene ID: k141_10463_53
Type: TC
Location: 65236 - 66312 (-)
Type: TC
Location: 65236 - 66312 (-)
Gene ID: k141_10463_54
Type: TC
Location: 66302 - 67099 (-)
Type: TC
Location: 66302 - 67099 (-)
Gene ID: k141_10463_55
Type: TC
Location: 67189 - 67671 (-)
Type: TC
Location: 67189 - 67671 (-)
Gene ID: k141_10463_56
Type: pfam
Location: 67788 - 68075 (-)
Type: pfam
Location: 67788 - 68075 (-)
Gene ID: k141_10463_57
Type: TC
Location: 68075 - 68515 (-)
Type: TC
Location: 68075 - 68515 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.