Cluster: CGMR088541_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19621 | k141_19621_9 | 7510 | 9084 | - | 3.A.1.134.12 |
| TC | k141_19621 | k141_19621_10 | 9085 | 9837 | - | 3.A.1.134.12 |
| pfam | k141_19621 | k141_19621_11 | 10153 | 11313 | - | LacY_symp | Nuc_H_symport | MFS_1 | MFS_1_like |
| TC | k141_19621 | k141_19621_12 | 11310 | 11777 | - | 4.A.1.2.6 |
| NULL(UNKNOWN) | k141_19621 | k141_19621_13 | 11791 | 12279 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_19621 | k141_19621_14 | 12293 | 13624 | - | GH4 |
| TC | k141_19621 | k141_19621_15 | 13638 | 15203 | - | 4.A.1.1.8 |
Gene ID: k141_19621_9
Type: TC
Location: 7510 - 9084 (-)
Type: TC
Location: 7510 - 9084 (-)
Gene ID: k141_19621_10
Type: TC
Location: 9085 - 9837 (-)
Type: TC
Location: 9085 - 9837 (-)
Gene ID: k141_19621_11
Type: pfam
Location: 10153 - 11313 (-)
Type: pfam
Location: 10153 - 11313 (-)
Gene ID: k141_19621_12
Type: TC
Location: 11310 - 11777 (-)
Type: TC
Location: 11310 - 11777 (-)
Gene ID: k141_19621_13
Type:
Location: 11791 - 12279 (-)
Type:
Location: 11791 - 12279 (-)
Gene ID: k141_19621_14
Type: CAZyme
Location: 12293 - 13624 (-)
Type: CAZyme
Location: 12293 - 13624 (-)
Gene ID: k141_19621_15
Type: TC
Location: 13638 - 15203 (-)
Type: TC
Location: 13638 - 15203 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.