Cluster: CGMR088541_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23549 | k141_23549_1 | 343 | 1776 | - | GH1 |
| TC | k141_23549 | k141_23549_2 | 1863 | 3779 | - | 4.A.1.2.6 |
| pfam | k141_23549 | k141_23549_3 | 3853 | 4713 | - | PRD | PRD | CAT_RBD |
| peptidase | k141_23549 | k141_23549_4 | 5066 | 6253 | - | M20.UPD |
| TC | k141_23549 | k141_23549_5 | 6267 | 7658 | - | 2.A.118.1.6 |
| TC | k141_23549 | k141_23549_6 | 8253 | 9905 | - | 4.A.1.1.3 |
| peptidase | k141_23549 | k141_23549_7 | 9925 | 11328 | - | M20.UPW |
| TC | k141_23549 | k141_23549_8 | 11592 | 12083 | - | 4.A.1.1.13 |
Gene ID: k141_23549_1
Type: CAZyme
Location: 343 - 1776 (-)
Type: CAZyme
Location: 343 - 1776 (-)
Gene ID: k141_23549_2
Type: TC
Location: 1863 - 3779 (-)
Type: TC
Location: 1863 - 3779 (-)
Gene ID: k141_23549_3
Type: pfam
Location: 3853 - 4713 (-)
Type: pfam
Location: 3853 - 4713 (-)
Gene ID: k141_23549_4
Type: peptidase
Location: 5066 - 6253 (-)
Type: peptidase
Location: 5066 - 6253 (-)
Gene ID: k141_23549_5
Type: TC
Location: 6267 - 7658 (-)
Type: TC
Location: 6267 - 7658 (-)
Gene ID: k141_23549_6
Type: TC
Location: 8253 - 9905 (-)
Type: TC
Location: 8253 - 9905 (-)
Gene ID: k141_23549_7
Type: peptidase
Location: 9925 - 11328 (-)
Type: peptidase
Location: 9925 - 11328 (-)
Gene ID: k141_23549_8
Type: TC
Location: 11592 - 12083 (-)
Type: TC
Location: 11592 - 12083 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.