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Cluster: CGMR088541_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_49460 k141_49460_2 1455 2816 + 2.A.66.1.1
TF k141_49460 k141_49460_3 2907 3611 + GntR
TC k141_49460 k141_49460_4 3811 4122 + 4.A.3.2.8
TC k141_49460 k141_49460_5 4144 5457 + 4.A.3.2.8
CAZyme k141_49460 k141_49460_6 5554 6864 + GH4
pfam k141_49460 k141_49460_7 6890 7621 + YdjC
TC k141_49460 k141_49460_8 7634 7951 + 4.A.3.2.2
NULL(UNKNOWN) k141_49460 k141_49460_9 8063 8527 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_49460 k141_49460_10 8797 9735 + Peripla_BP_2
TC k141_49460 k141_49460_11 9863 10876 + 3.A.1.14.15
TC k141_49460 k141_49460_12 10882 11904 + 3.A.1.14.15
TC k141_49460 k141_49460_13 11919 12701 + 3.A.1.14.7
TC k141_49460 k141_49460_14 12713 14053 + 2.A.66.1.32
Gene ID: k141_49460_2
Type: TC
Location: 1455 - 2816 (+)
Gene ID: k141_49460_3
Type: TF
Location: 2907 - 3611 (+)
Gene ID: k141_49460_4
Type: TC
Location: 3811 - 4122 (+)
Gene ID: k141_49460_5
Type: TC
Location: 4144 - 5457 (+)
Gene ID: k141_49460_6
Type: CAZyme
Location: 5554 - 6864 (+)
Gene ID: k141_49460_7
Type: pfam
Location: 6890 - 7621 (+)
Gene ID: k141_49460_8
Type: TC
Location: 7634 - 7951 (+)
Gene ID: k141_49460_9
Type:
Location: 8063 - 8527 (-)
Gene ID: k141_49460_10
Type: STP
Location: 8797 - 9735 (+)
Gene ID: k141_49460_11
Type: TC
Location: 9863 - 10876 (+)
Gene ID: k141_49460_12
Type: TC
Location: 10882 - 11904 (+)
Gene ID: k141_49460_13
Type: TC
Location: 11919 - 12701 (+)
Gene ID: k141_49460_14
Type: TC
Location: 12713 - 14053 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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