Cluster: CGMR088541_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3750 | k141_3750_9 | 10596 | 11561 | + | 9.B.146.1.6 |
| pfam | k141_3750 | k141_3750_10 | 11580 | 12935 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_3750 | k141_3750_11 | 12987 | 14117 | + | 2.A.103.1.3 |
| CAZyme | k141_3750 | k141_3750_12 | 14135 | 15361 | + | GT28 |
Gene ID: k141_3750_9
Type: TC
Location: 10596 - 11561 (+)
Type: TC
Location: 10596 - 11561 (+)
Gene ID: k141_3750_10
Type: pfam
Location: 11580 - 12935 (+)
Type: pfam
Location: 11580 - 12935 (+)
Gene ID: k141_3750_11
Type: TC
Location: 12987 - 14117 (+)
Type: TC
Location: 12987 - 14117 (+)
Gene ID: k141_3750_12
Type: CAZyme
Location: 14135 - 15361 (+)
Type: CAZyme
Location: 14135 - 15361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.