Cluster: CGMR088013_CGC44
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR088013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57617 | k141_57617_47 | 63474 | 65678 | - | 3.A.10.1.11 |
| TC | k141_57617 | k141_57617_48 | 66365 | 69547 | + | 1.B.14.6.1 |
| TC | k141_57617 | k141_57617_49 | 69560 | 71263 | + | 8.A.46.1.3 |
| CAZyme | k141_57617 | k141_57617_50 | 71345 | 73279 | + | PL33_1 |
| CAZyme | k141_57617 | k141_57617_51 | 73292 | 75370 | + | GH2 |
| STP | k141_57617 | k141_57617_52 | 75931 | 76779 | + | PfkB |
| TF | k141_57617 | k141_57617_53 | 76859 | 77665 | - | KilA-N |
| TC | k141_57617 | k141_57617_54 | 77727 | 78941 | - | 2.A.40.1.4 |
| TC | k141_57617 | k141_57617_55 | 79213 | 81564 | - | 1.B.14.1.4 |
| pfam | k141_57617 | k141_57617_56 | 81816 | 82781 | + | ApbA |
| CAZyme | k141_57617 | k141_57617_57 | 83162 | 85306 | - | GH97 |
| CAZyme | k141_57617 | k141_57617_58 | 85490 | 86911 | - | GH27 |
| CAZyme | k141_57617 | k141_57617_59 | 86946 | 88397 | - | GH27 |
| pfam | k141_57617 | k141_57617_60 | 88492 | 89703 | - | SusF_SusE | SusF_SusE | SusF_SusE |
| TC | k141_57617 | k141_57617_61 | 89898 | 91637 | - | 8.A.46.1.1 |
| TC | k141_57617 | k141_57617_62 | 91669 | 94653 | - | 1.B.14.6.1 |
Gene ID: k141_57617_47
Type: TC
Location: 63474 - 65678 (-)
Type: TC
Location: 63474 - 65678 (-)
Gene ID: k141_57617_48
Type: TC
Location: 66365 - 69547 (+)
Type: TC
Location: 66365 - 69547 (+)
Gene ID: k141_57617_49
Type: TC
Location: 69560 - 71263 (+)
Type: TC
Location: 69560 - 71263 (+)
Gene ID: k141_57617_50
Type: CAZyme
Location: 71345 - 73279 (+)
Type: CAZyme
Location: 71345 - 73279 (+)
Gene ID: k141_57617_51
Type: CAZyme
Location: 73292 - 75370 (+)
Type: CAZyme
Location: 73292 - 75370 (+)
Gene ID: k141_57617_52
Type: STP
Location: 75931 - 76779 (+)
Type: STP
Location: 75931 - 76779 (+)
Gene ID: k141_57617_53
Type: TF
Location: 76859 - 77665 (-)
Type: TF
Location: 76859 - 77665 (-)
Gene ID: k141_57617_54
Type: TC
Location: 77727 - 78941 (-)
Type: TC
Location: 77727 - 78941 (-)
Gene ID: k141_57617_55
Type: TC
Location: 79213 - 81564 (-)
Type: TC
Location: 79213 - 81564 (-)
Gene ID: k141_57617_56
Type: pfam
Location: 81816 - 82781 (+)
Type: pfam
Location: 81816 - 82781 (+)
Gene ID: k141_57617_57
Type: CAZyme
Location: 83162 - 85306 (-)
Type: CAZyme
Location: 83162 - 85306 (-)
Gene ID: k141_57617_58
Type: CAZyme
Location: 85490 - 86911 (-)
Type: CAZyme
Location: 85490 - 86911 (-)
Gene ID: k141_57617_59
Type: CAZyme
Location: 86946 - 88397 (-)
Type: CAZyme
Location: 86946 - 88397 (-)
Gene ID: k141_57617_60
Type: pfam
Location: 88492 - 89703 (-)
Type: pfam
Location: 88492 - 89703 (-)
Gene ID: k141_57617_61
Type: TC
Location: 89898 - 91637 (-)
Type: TC
Location: 89898 - 91637 (-)
Gene ID: k141_57617_62
Type: TC
Location: 91669 - 94653 (-)
Type: TC
Location: 91669 - 94653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella oris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.