Cluster: CGMR087432_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR087432
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_66063 | k141_66063_91 | 84705 | 85307 | + | 1.A.78.2.3 |
| TC | k141_66063 | k141_66063_92 | 85512 | 86705 | + | 2.A.1.2.69 |
| NULL(UNKNOWN) | k141_66063 | k141_66063_93 | 86888 | 87034 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_66063 | k141_66063_94 | 87235 | 87717 | + | 9.A.24.1.7 |
| pfam | k141_66063 | k141_66063_95 | 88877 | 89344 | - | dCMP_cyt_deam_1 | MafB19-deam |
| pfam | k141_66063 | k141_66063_96 | 89457 | 90374 | - | GFO_IDH_MocA | YceM-like_C |
| CAZyme | k141_66063 | k141_66063_97 | 90761 | 91924 | + | GT4 |
Gene ID: k141_66063_91
Type: TC
Location: 84705 - 85307 (+)
Type: TC
Location: 84705 - 85307 (+)
Gene ID: k141_66063_92
Type: TC
Location: 85512 - 86705 (+)
Type: TC
Location: 85512 - 86705 (+)
Gene ID: k141_66063_93
Type:
Location: 86888 - 87034 (-)
Type:
Location: 86888 - 87034 (-)
Gene ID: k141_66063_94
Type: TC
Location: 87235 - 87717 (+)
Type: TC
Location: 87235 - 87717 (+)
Gene ID: k141_66063_95
Type: pfam
Location: 88877 - 89344 (-)
Type: pfam
Location: 88877 - 89344 (-)
Gene ID: k141_66063_96
Type: pfam
Location: 89457 - 90374 (-)
Type: pfam
Location: 89457 - 90374 (-)
Gene ID: k141_66063_97
Type: CAZyme
Location: 90761 - 91924 (+)
Type: CAZyme
Location: 90761 - 91924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.