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Cluster: CGMR087432_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_56912 k141_56912_114 114982 115746 - GH25
NULL(UNKNOWN) k141_56912 k141_56912_115 115756 115908 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_56912 k141_56912_116 116076 116606 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_56912 k141_56912_117 117008 118276 + 2.A.1.6.3
TC k141_56912 k141_56912_118 118704 119390 + 3.A.1.3.13
TC k141_56912 k141_56912_119 119387 120055 + 3.A.1.3.13
TC k141_56912 k141_56912_120 120070 120948 + 3.A.1.3.13
TC k141_56912 k141_56912_121 120958 121707 + 3.A.1.3.10
pfam k141_56912 k141_56912_122 121704 122753 + NAD_Gly3P_dh_N | Shikimate_DH | Octopine_DH | ApbA | Sacchrp_dh_NADP | F420_oxidored
pfam k141_56912 k141_56912_123 122989 124173 - Mannitol_dh | Mannitol_dh_C
TC k141_56912 k141_56912_124 124202 126166 - 4.A.2.1.12
Gene ID: k141_56912_114
Type: CAZyme
Location: 114982 - 115746 (-)
Gene ID: k141_56912_115
Type:
Location: 115756 - 115908 (-)
Gene ID: k141_56912_116
Type:
Location: 116076 - 116606 (-)
Gene ID: k141_56912_117
Type: TC
Location: 117008 - 118276 (+)
Gene ID: k141_56912_118
Type: TC
Location: 118704 - 119390 (+)
Gene ID: k141_56912_119
Type: TC
Location: 119387 - 120055 (+)
Gene ID: k141_56912_120
Type: TC
Location: 120070 - 120948 (+)
Gene ID: k141_56912_121
Type: TC
Location: 120958 - 121707 (+)
Gene ID: k141_56912_122
Type: pfam
Location: 121704 - 122753 (+)
Gene ID: k141_56912_123
Type: pfam
Location: 122989 - 124173 (-)
Gene ID: k141_56912_124
Type: TC
Location: 124202 - 126166 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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