Cluster: CGMR085333_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR085333
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_241224 | k141_241224_3 | 1903 | 2817 | + | GH23 |
| pfam | k141_241224 | k141_241224_4 | 2968 | 5787 | + | UvrA_DNA-bind | UvrA_inter |
| TC | k141_241224 | k141_241224_5 | 6079 | 6759 | + | 9.B.20.1.4 |
| pfam | k141_241224 | k141_241224_6 | 7133 | 8347 | - | Acetate_kinase |
| pfam | k141_241224 | k141_241224_7 | 8394 | 9407 | - | PTA_PTB |
| TC | k141_241224 | k141_241224_8 | 9423 | 9794 | - | 1.A.43.1.4 |
Gene ID: k141_241224_3
Type: CAZyme
Location: 1903 - 2817 (+)
Type: CAZyme
Location: 1903 - 2817 (+)
Gene ID: k141_241224_4
Type: pfam
Location: 2968 - 5787 (+)
Type: pfam
Location: 2968 - 5787 (+)
Gene ID: k141_241224_5
Type: TC
Location: 6079 - 6759 (+)
Type: TC
Location: 6079 - 6759 (+)
Gene ID: k141_241224_6
Type: pfam
Location: 7133 - 8347 (-)
Type: pfam
Location: 7133 - 8347 (-)
Gene ID: k141_241224_7
Type: pfam
Location: 8394 - 9407 (-)
Type: pfam
Location: 8394 - 9407 (-)
Gene ID: k141_241224_8
Type: TC
Location: 9423 - 9794 (-)
Type: TC
Location: 9423 - 9794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
WRDF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.