Cluster: CGMR082803_CGC27
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082803
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4449 | k141_4449_9 | 8268 | 9638 | + | 9.A.40.2.2 |
| TC | k141_4449 | k141_4449_10 | 9727 | 11091 | + | 9.A.40.2.1 |
| pfam | k141_4449 | k141_4449_11 | 11144 | 11377 | - | VEG |
| TC | k141_4449 | k141_4449_12 | 11788 | 12273 | + | 3.A.11.1.4 |
| sulfatase | k141_4449 | k141_4449_13 | 12273 | 13229 | + | S1_63 |
| pfam | k141_4449 | k141_4449_14 | 13411 | 14733 | + | LytR_cpsA_psr |
| TC | k141_4449 | k141_4449_15 | 15079 | 16989 | + | 4.A.1.2.3 |
| CAZyme | k141_4449 | k141_4449_16 | 17017 | 17550 | + | GH1 |
| CAZyme | k141_4449 | k141_4449_17 | 17605 | 18453 | + | GH1 |
| STP | k141_4449 | k141_4449_18 | 18979 | 19911 | + | SBP_bac_3 |
| TC | k141_4449 | k141_4449_19 | 20097 | 20864 | + | 3.A.1.9.2 |
| TC | k141_4449 | k141_4449_20 | 20867 | 21649 | + | 3.A.1.9.1 |
| TC | k141_4449 | k141_4449_21 | 21649 | 22443 | + | 3.A.1.9.1 |
| pfam | k141_4449 | k141_4449_22 | 22549 | 24108 | + | Metallophos | 5_nucleotid_C |
| TC | k141_4449 | k141_4449_23 | 24285 | 25526 | + | 2.A.41.1.3 |
Gene ID: k141_4449_9
Type: TC
Location: 8268 - 9638 (+)
Type: TC
Location: 8268 - 9638 (+)
Gene ID: k141_4449_10
Type: TC
Location: 9727 - 11091 (+)
Type: TC
Location: 9727 - 11091 (+)
Gene ID: k141_4449_11
Type: pfam
Location: 11144 - 11377 (-)
Type: pfam
Location: 11144 - 11377 (-)
Gene ID: k141_4449_12
Type: TC
Location: 11788 - 12273 (+)
Type: TC
Location: 11788 - 12273 (+)
Gene ID: k141_4449_13
Type: sulfatase
Location: 12273 - 13229 (+)
Type: sulfatase
Location: 12273 - 13229 (+)
Gene ID: k141_4449_14
Type: pfam
Location: 13411 - 14733 (+)
Type: pfam
Location: 13411 - 14733 (+)
Gene ID: k141_4449_15
Type: TC
Location: 15079 - 16989 (+)
Type: TC
Location: 15079 - 16989 (+)
Gene ID: k141_4449_16
Type: CAZyme
Location: 17017 - 17550 (+)
Type: CAZyme
Location: 17017 - 17550 (+)
Gene ID: k141_4449_17
Type: CAZyme
Location: 17605 - 18453 (+)
Type: CAZyme
Location: 17605 - 18453 (+)
Gene ID: k141_4449_18
Type: STP
Location: 18979 - 19911 (+)
Type: STP
Location: 18979 - 19911 (+)
Gene ID: k141_4449_19
Type: TC
Location: 20097 - 20864 (+)
Type: TC
Location: 20097 - 20864 (+)
Gene ID: k141_4449_20
Type: TC
Location: 20867 - 21649 (+)
Type: TC
Location: 20867 - 21649 (+)
Gene ID: k141_4449_21
Type: TC
Location: 21649 - 22443 (+)
Type: TC
Location: 21649 - 22443 (+)
Gene ID: k141_4449_22
Type: pfam
Location: 22549 - 24108 (+)
Type: pfam
Location: 22549 - 24108 (+)
Gene ID: k141_4449_23
Type: TC
Location: 24285 - 25526 (+)
Type: TC
Location: 24285 - 25526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella cibaria
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.