dbCAN Logo

Cluster: CGMR082803_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_86881 k141_86881_168 174000 175400 - 2.A.1.1.116
TF k141_86881 k141_86881_169 175629 176231 + HTH_3
pfam k141_86881 k141_86881_170 176297 177112 - Bgal_small_N
CAZyme k141_86881 k141_86881_171 177227 179122 - GH2
TC k141_86881 k141_86881_172 179291 181408 - 3.A.9.1.2
pfam k141_86881 k141_86881_173 181692 182429 - adh_short | KR | adh_short_C2
TC k141_86881 k141_86881_174 182430 182927 - 2.A.88.9.2
NULL(UNKNOWN) k141_86881 k141_86881_175 183093 183560 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_86881 k141_86881_176 183679 185286 + 2.A.3.11.1
Gene ID: k141_86881_168
Type: TC
Location: 174000 - 175400 (-)
Gene ID: k141_86881_169
Type: TF
Location: 175629 - 176231 (+)
Gene ID: k141_86881_170
Type: pfam
Location: 176297 - 177112 (-)
Gene ID: k141_86881_171
Type: CAZyme
Location: 177227 - 179122 (-)
Gene ID: k141_86881_172
Type: TC
Location: 179291 - 181408 (-)
Gene ID: k141_86881_173
Type: pfam
Location: 181692 - 182429 (-)
Gene ID: k141_86881_174
Type: TC
Location: 182430 - 182927 (-)
Gene ID: k141_86881_175
Type:
Location: 183093 - 183560 (+)
Gene ID: k141_86881_176
Type: TC
Location: 183679 - 185286 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella cibaria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List