Cluster: CGMR076809_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33221 | k141_33221_133 | 165676 | 166836 | - | 2.A.1.60.2 |
| TC | k141_33221 | k141_33221_134 | 167065 | 167445 | - | 3.D.1.2.1 |
| pfam | k141_33221 | k141_33221_135 | 167605 | 168657 | - | Hydrolase | S6PP | Hydrolase_3 |
| pfam | k141_33221 | k141_33221_136 | 168930 | 170291 | + | Ank | Ank | Ank | Ank_2 |
| CAZyme | k141_33221 | k141_33221_137 | 170317 | 172104 | - | GH181 |
Gene ID: k141_33221_133
Type: TC
Location: 165676 - 166836 (-)
Type: TC
Location: 165676 - 166836 (-)
Gene ID: k141_33221_134
Type: TC
Location: 167065 - 167445 (-)
Type: TC
Location: 167065 - 167445 (-)
Gene ID: k141_33221_135
Type: pfam
Location: 167605 - 168657 (-)
Type: pfam
Location: 167605 - 168657 (-)
Gene ID: k141_33221_136
Type: pfam
Location: 168930 - 170291 (+)
Type: pfam
Location: 168930 - 170291 (+)
Gene ID: k141_33221_137
Type: CAZyme
Location: 170317 - 172104 (-)
Type: CAZyme
Location: 170317 - 172104 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_33221_134 | vegetarian > omnivore | 1.87246 | 0.02630 |
| k141_33221_134 | vegetarian > vegan | 1.45106 | 0.01468 |