Cluster: CGMR076809_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_113551 | k141_113551_25 | 26872 | 29865 | + | GH84 |
| NULL(UNKNOWN) | k141_113551 | k141_113551_26 | 29982 | 30626 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_113551 | k141_113551_27 | 30851 | 31915 | + | NMT1 | NMT1_2 |
| TC | k141_113551 | k141_113551_28 | 31912 | 32700 | + | 3.A.1.16.1 |
| TC | k141_113551 | k141_113551_29 | 32697 | 33488 | + | 3.A.1.16.4 |
Gene ID: k141_113551_25
Type: CAZyme
Location: 26872 - 29865 (+)
Type: CAZyme
Location: 26872 - 29865 (+)
Gene ID: k141_113551_26
Type:
Location: 29982 - 30626 (-)
Type:
Location: 29982 - 30626 (-)
Gene ID: k141_113551_27
Type: pfam
Location: 30851 - 31915 (+)
Type: pfam
Location: 30851 - 31915 (+)
Gene ID: k141_113551_28
Type: TC
Location: 31912 - 32700 (+)
Type: TC
Location: 31912 - 32700 (+)
Gene ID: k141_113551_29
Type: TC
Location: 32697 - 33488 (+)
Type: TC
Location: 32697 - 33488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_113551_28 | vegetarian > omnivore | 1.06638 | 0.01810 |