Cluster: CGMR076809_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076809
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33221 | k141_33221_90 | 114728 | 116374 | + | 3.A.15.4.1 |
| TC | k141_33221 | k141_33221_91 | 116403 | 118061 | + | 3.A.15.4.1 |
| TC | k141_33221 | k141_33221_92 | 118128 | 119396 | + | 3.A.11.1.3 |
| pfam | k141_33221 | k141_33221_93 | 119418 | 120086 | + | N_methyl |
| CAZyme | k141_33221 | k141_33221_94 | 120222 | 121166 | + | GT2 |
| CAZyme | k141_33221 | k141_33221_95 | 121175 | 121996 | + | GT2 |
Gene ID: k141_33221_90
Type: TC
Location: 114728 - 116374 (+)
Type: TC
Location: 114728 - 116374 (+)
Gene ID: k141_33221_91
Type: TC
Location: 116403 - 118061 (+)
Type: TC
Location: 116403 - 118061 (+)
Gene ID: k141_33221_92
Type: TC
Location: 118128 - 119396 (+)
Type: TC
Location: 118128 - 119396 (+)
Gene ID: k141_33221_93
Type: pfam
Location: 119418 - 120086 (+)
Type: pfam
Location: 119418 - 120086 (+)
Gene ID: k141_33221_94
Type: CAZyme
Location: 120222 - 121166 (+)
Type: CAZyme
Location: 120222 - 121166 (+)
Gene ID: k141_33221_95
Type: CAZyme
Location: 121175 - 121996 (+)
Type: CAZyme
Location: 121175 - 121996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.