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Cluster: CGMR076809_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33221 k141_33221_45 61567 63003 + 8.A.21.2.1
pfam k141_33221 k141_33221_46 63030 64388 + UPF0004 | Radical_SAM | TRAM_2
NULL(UNKNOWN) k141_33221 k141_33221_47 64499 65116 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_33221 k141_33221_48 65408 67267 + GH77
pfam k141_33221 k141_33221_49 67426 68286 + MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
pfam k141_33221 k141_33221_50 68530 69087 - Lum_binding | Lum_binding
TC k141_33221 k141_33221_51 69157 70770 - 2.A.111.2.1
CAZyme k141_33221 k141_33221_52 70963 72423 + CE4
TC k141_33221 k141_33221_53 72725 73969 + 3.D.1.5.1
TC k141_33221 k141_33221_54 74019 74600 + 3.D.1.3.1
TC k141_33221 k141_33221_55 74630 76030 + 3.D.1.3.1
TC k141_33221 k141_33221_56 76082 77818 + 3.D.1.6.3
TC k141_33221 k141_33221_57 77854 79122 + 3.D.1.5.1
STP k141_33221 k141_33221_58 79155 79718 + Fer4 | Fer4
TC k141_33221 k141_33221_59 79755 80555 + 3.D.1.1.1
TC k141_33221 k141_33221_60 80584 80901 + 3.D.1.3.1
TC k141_33221 k141_33221_61 80925 82757 + 3.D.1.3.1
TC k141_33221 k141_33221_62 82779 84203 + 3.D.1.5.1
TC k141_33221 k141_33221_63 84251 85633 + 3.D.1.5.1
Gene ID: k141_33221_45
Type: TC
Location: 61567 - 63003 (+)
Gene ID: k141_33221_46
Type: pfam
Location: 63030 - 64388 (+)
Gene ID: k141_33221_47
Type:
Location: 64499 - 65116 (-)
Gene ID: k141_33221_48
Type: CAZyme
Location: 65408 - 67267 (+)
Gene ID: k141_33221_49
Type: pfam
Location: 67426 - 68286 (+)
Gene ID: k141_33221_50
Type: pfam
Location: 68530 - 69087 (-)
Gene ID: k141_33221_51
Type: TC
Location: 69157 - 70770 (-)
Gene ID: k141_33221_52
Type: CAZyme
Location: 70963 - 72423 (+)
Gene ID: k141_33221_53
Type: TC
Location: 72725 - 73969 (+)
Gene ID: k141_33221_54
Type: TC
Location: 74019 - 74600 (+)
Gene ID: k141_33221_55
Type: TC
Location: 74630 - 76030 (+)
Gene ID: k141_33221_56
Type: TC
Location: 76082 - 77818 (+)
Gene ID: k141_33221_57
Type: TC
Location: 77854 - 79122 (+)
Gene ID: k141_33221_58
Type: STP
Location: 79155 - 79718 (+)
Gene ID: k141_33221_59
Type: TC
Location: 79755 - 80555 (+)
Gene ID: k141_33221_60
Type: TC
Location: 80584 - 80901 (+)
Gene ID: k141_33221_61
Type: TC
Location: 80925 - 82757 (+)
Gene ID: k141_33221_62
Type: TC
Location: 82779 - 84203 (+)
Gene ID: k141_33221_63
Type: TC
Location: 84251 - 85633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_33221_47 vegetarian > omnivore 1.00538 0.02630
k141_33221_49 vegetarian > omnivore 1.18896 0.02630
k141_33221_49 vegetarian > vegan 1.33567 0.01468
k141_33221_60 vegetarian > omnivore 1.36240 0.02630
k141_33221_60 vegetarian > vegan 1.02037 0.01468

🧭 Explore Read Mapping of CGC

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