Cluster: CGMR076566_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5050 | k141_5050_19 | 21185 | 22093 | - | 2.A.7.3.57 |
| sulfatase | k141_5050 | k141_5050_20 | 22252 | 23400 | + | S1_22 |
| CAZyme | k141_5050 | k141_5050_21 | 23692 | 24861 | - | GH175 |
| pfam | k141_5050 | k141_5050_22 | 25381 | 26475 | - | LptF_LptG |
| pfam | k141_5050 | k141_5050_23 | 26564 | 27694 | - | TGT |
| CAZyme | k141_5050 | k141_5050_24 | 27855 | 29036 | + | GT2 |
Gene ID: k141_5050_19
Type: TC
Location: 21185 - 22093 (-)
Type: TC
Location: 21185 - 22093 (-)
Gene ID: k141_5050_20
Type: sulfatase
Location: 22252 - 23400 (+)
Type: sulfatase
Location: 22252 - 23400 (+)
Gene ID: k141_5050_21
Type: CAZyme
Location: 23692 - 24861 (-)
Type: CAZyme
Location: 23692 - 24861 (-)
Gene ID: k141_5050_22
Type: pfam
Location: 25381 - 26475 (-)
Type: pfam
Location: 25381 - 26475 (-)
Gene ID: k141_5050_23
Type: pfam
Location: 26564 - 27694 (-)
Type: pfam
Location: 26564 - 27694 (-)
Gene ID: k141_5050_24
Type: CAZyme
Location: 27855 - 29036 (+)
Type: CAZyme
Location: 27855 - 29036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.