Cluster: CGMR076566_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076566
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_378578 | k141_378578_38 | 42432 | 44675 | + | 2.A.37.1.5 |
| pfam | k141_378578 | k141_378578_39 | 44851 | 46299 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | k141_378578 | k141_378578_40 | 46333 | 47580 | + | 9.B.146.1.6 |
| pfam | k141_378578 | k141_378578_41 | 47583 | 48923 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_378578 | k141_378578_42 | 48939 | 50225 | + | 2.A.103.1.3 |
| CAZyme | k141_378578 | k141_378578_43 | 50262 | 51374 | + | GT28 |
Gene ID: k141_378578_38
Type: TC
Location: 42432 - 44675 (+)
Type: TC
Location: 42432 - 44675 (+)
Gene ID: k141_378578_39
Type: pfam
Location: 44851 - 46299 (+)
Type: pfam
Location: 44851 - 46299 (+)
Gene ID: k141_378578_40
Type: TC
Location: 46333 - 47580 (+)
Type: TC
Location: 46333 - 47580 (+)
Gene ID: k141_378578_41
Type: pfam
Location: 47583 - 48923 (+)
Type: pfam
Location: 47583 - 48923 (+)
Gene ID: k141_378578_42
Type: TC
Location: 48939 - 50225 (+)
Type: TC
Location: 48939 - 50225 (+)
Gene ID: k141_378578_43
Type: CAZyme
Location: 50262 - 51374 (+)
Type: CAZyme
Location: 50262 - 51374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.