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Cluster: CGMR076566_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_138980 k141_138980_4 2883 4199 - 2.A.23.1.2
pfam k141_138980 k141_138980_5 4354 5523 - Pect-lyase_RHGA_epim
TC k141_138980 k141_138980_6 5684 6964 + 9.B.196.1.2
CAZyme k141_138980 k141_138980_7 7093 9654 + GH3
pfam k141_138980 k141_138980_8 9789 13007 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
TC k141_138980 k141_138980_9 13208 14659 - 1.I.1.1.3
CAZyme k141_138980 k141_138980_10 14713 17418 - CBM67 | GH78
NULL(UNKNOWN) k141_138980 k141_138980_11 17447 18721 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_138980 k141_138980_12 18938 20578 - GH78
Gene ID: k141_138980_4
Type: TC
Location: 2883 - 4199 (-)
Gene ID: k141_138980_5
Type: pfam
Location: 4354 - 5523 (-)
Gene ID: k141_138980_6
Type: TC
Location: 5684 - 6964 (+)
Gene ID: k141_138980_7
Type: CAZyme
Location: 7093 - 9654 (+)
Gene ID: k141_138980_8
Type: pfam
Location: 9789 - 13007 (+)
Gene ID: k141_138980_9
Type: TC
Location: 13208 - 14659 (-)
Gene ID: k141_138980_10
Type: CAZyme
Location: 14713 - 17418 (-)
Gene ID: k141_138980_11
Type:
Location: 17447 - 18721 (-)
Gene ID: k141_138980_12
Type: CAZyme
Location: 18938 - 20578 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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