Cluster: CGMR073893_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR073893
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13067 | k141_13067_6 | 5346 | 7619 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | k141_13067 | k141_13067_7 | 7751 | 7945 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_13067 | k141_13067_8 | 8297 | 8563 | + | 8.A.8.1.1 |
| TC | k141_13067 | k141_13067_9 | 8563 | 10284 | + | 8.A.7.1.1 |
| CAZyme | k141_13067 | k141_13067_10 | 10508 | 11686 | + | GT4 |
| CAZyme | k141_13067 | k141_13067_11 | 11710 | 12735 | + | GT4 |
| TC | k141_13067 | k141_13067_12 | 12735 | 13748 | + | 4.D.2.1.7 |
Gene ID: k141_13067_6
Type: TC
Location: 5346 - 7619 (-)
Type: TC
Location: 5346 - 7619 (-)
Gene ID: k141_13067_7
Type:
Location: 7751 - 7945 (+)
Type:
Location: 7751 - 7945 (+)
Gene ID: k141_13067_8
Type: TC
Location: 8297 - 8563 (+)
Type: TC
Location: 8297 - 8563 (+)
Gene ID: k141_13067_9
Type: TC
Location: 8563 - 10284 (+)
Type: TC
Location: 8563 - 10284 (+)
Gene ID: k141_13067_10
Type: CAZyme
Location: 10508 - 11686 (+)
Type: CAZyme
Location: 10508 - 11686 (+)
Gene ID: k141_13067_11
Type: CAZyme
Location: 11710 - 12735 (+)
Type: CAZyme
Location: 11710 - 12735 (+)
Gene ID: k141_13067_12
Type: TC
Location: 12735 - 13748 (+)
Type: TC
Location: 12735 - 13748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus acidipiscis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.