dbCAN Logo

Cluster: CGMR073893_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5305 k141_5305_28 23377 23994 - CBM50
STP k141_5305 k141_5305_29 24271 25650 - MCPsignal
NULL(UNKNOWN) k141_5305 k141_5305_30 25961 26218 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_5305 k141_5305_31 26417 27406 + 8.A.5.1.1
TF k141_5305 k141_5305_32 27521 27814 - HTH_3
pfam k141_5305 k141_5305_33 27830 28117 - HigB-like_toxin
CAZyme k141_5305 k141_5305_34 28653 32513 + GH92
CAZyme k141_5305 k141_5305_35 32595 35207 - GH38
TC k141_5305 k141_5305_36 35297 36391 - 4.A.2.1.8
TC k141_5305 k141_5305_37 36407 36733 - 4.A.2.1.10
TC k141_5305 k141_5305_38 36755 37267 - 4.A.2.1.23
TF k141_5305 k141_5305_39 37260 39167 - Mga | Mga
CAZyme k141_5305 k141_5305_40 39357 40493 + GH76
Gene ID: k141_5305_28
Type: CAZyme
Location: 23377 - 23994 (-)
Gene ID: k141_5305_29
Type: STP
Location: 24271 - 25650 (-)
Gene ID: k141_5305_30
Type:
Location: 25961 - 26218 (-)
Gene ID: k141_5305_31
Type: TC
Location: 26417 - 27406 (+)
Gene ID: k141_5305_32
Type: TF
Location: 27521 - 27814 (-)
Gene ID: k141_5305_33
Type: pfam
Location: 27830 - 28117 (-)
Gene ID: k141_5305_34
Type: CAZyme
Location: 28653 - 32513 (+)
Gene ID: k141_5305_35
Type: CAZyme
Location: 32595 - 35207 (-)
Gene ID: k141_5305_36
Type: TC
Location: 35297 - 36391 (-)
Gene ID: k141_5305_37
Type: TC
Location: 36407 - 36733 (-)
Gene ID: k141_5305_38
Type: TC
Location: 36755 - 37267 (-)
Gene ID: k141_5305_39
Type: TF
Location: 37260 - 39167 (-)
Gene ID: k141_5305_40
Type: CAZyme
Location: 39357 - 40493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List