Cluster: CGMR073893_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR073893
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12325 | k141_12325_71 | 68743 | 70173 | - | 4.A.2.1.25 |
| TC | k141_12325 | k141_12325_72 | 70179 | 70622 | - | 4.A.2.1.23 |
| STP | k141_12325 | k141_12325_73 | 70853 | 71617 | - | NTP_transf_2 |
| CAZyme | k141_12325 | k141_12325_74 | 72101 | 74326 | - | GH3 |
| TC | k141_12325 | k141_12325_75 | 74385 | 75647 | - | 4.A.3.2.3 |
| TF | k141_12325 | k141_12325_76 | 75766 | 76611 | + | HTH_AraC |
| TC | k141_12325 | k141_12325_77 | 76895 | 78064 | - | 2.A.1.2.65 |
Gene ID: k141_12325_71
Type: TC
Location: 68743 - 70173 (-)
Type: TC
Location: 68743 - 70173 (-)
Gene ID: k141_12325_72
Type: TC
Location: 70179 - 70622 (-)
Type: TC
Location: 70179 - 70622 (-)
Gene ID: k141_12325_73
Type: STP
Location: 70853 - 71617 (-)
Type: STP
Location: 70853 - 71617 (-)
Gene ID: k141_12325_74
Type: CAZyme
Location: 72101 - 74326 (-)
Type: CAZyme
Location: 72101 - 74326 (-)
Gene ID: k141_12325_75
Type: TC
Location: 74385 - 75647 (-)
Type: TC
Location: 74385 - 75647 (-)
Gene ID: k141_12325_76
Type: TF
Location: 75766 - 76611 (+)
Type: TF
Location: 75766 - 76611 (+)
Gene ID: k141_12325_77
Type: TC
Location: 76895 - 78064 (-)
Type: TC
Location: 76895 - 78064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus acidipiscis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.