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Cluster: CGMR073893_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11232 k141_11232_22 29226 30524 + 2.A.40.3.1
TC k141_11232 k141_11232_23 30712 32454 + 9.B.33.1.2
TF k141_11232 k141_11232_24 32454 33203 + LytTR
TC k141_11232 k141_11232_25 33374 33823 + 1.E.14.1.10
TC k141_11232 k141_11232_26 33820 34545 + 2.A.122.1.6
pfam k141_11232 k141_11232_27 34733 35701 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 | KARI_N
NULL(UNKNOWN) k141_11232 k141_11232_28 35766 36029 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_11232 k141_11232_29 36143 37207 + CBM50
TC k141_11232 k141_11232_30 37662 38996 + 2.A.40.7.5
Gene ID: k141_11232_22
Type: TC
Location: 29226 - 30524 (+)
Gene ID: k141_11232_23
Type: TC
Location: 30712 - 32454 (+)
Gene ID: k141_11232_24
Type: TF
Location: 32454 - 33203 (+)
Gene ID: k141_11232_25
Type: TC
Location: 33374 - 33823 (+)
Gene ID: k141_11232_26
Type: TC
Location: 33820 - 34545 (+)
Gene ID: k141_11232_27
Type: pfam
Location: 34733 - 35701 (+)
Gene ID: k141_11232_28
Type:
Location: 35766 - 36029 (+)
Gene ID: k141_11232_29
Type: CAZyme
Location: 36143 - 37207 (+)
Gene ID: k141_11232_30
Type: TC
Location: 37662 - 38996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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