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Cluster: CGMR073586_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34552 k141_34552_32 33116 36274 + 1.B.14.6.1
TC k141_34552 k141_34552_33 36287 38128 + 8.A.46.1.6
pfam k141_34552 k141_34552_34 38201 39886 - DUF6057
pfam k141_34552 k141_34552_35 39900 41327 - PD40 | PD40
CAZyme k141_34552 k141_34552_36 41490 42971 + GH28
CAZyme k141_34552 k141_34552_37 43030 43782 + GH28
CAZyme k141_34552 k141_34552_38 43798 46680 + GH106
CAZyme k141_34552 k141_34552_39 46717 48186 + GH28
CAZyme k141_34552 k141_34552_40 48608 50260 - GH156
CAZyme k141_34552 k141_34552_41 50275 52596 - GH92
Gene ID: k141_34552_32
Type: TC
Location: 33116 - 36274 (+)
Gene ID: k141_34552_33
Type: TC
Location: 36287 - 38128 (+)
Gene ID: k141_34552_34
Type: pfam
Location: 38201 - 39886 (-)
Gene ID: k141_34552_35
Type: pfam
Location: 39900 - 41327 (-)
Gene ID: k141_34552_36
Type: CAZyme
Location: 41490 - 42971 (+)
Gene ID: k141_34552_37
Type: CAZyme
Location: 43030 - 43782 (+)
Gene ID: k141_34552_38
Type: CAZyme
Location: 43798 - 46680 (+)
Gene ID: k141_34552_39
Type: CAZyme
Location: 46717 - 48186 (+)
Gene ID: k141_34552_40
Type: CAZyme
Location: 48608 - 50260 (-)
Gene ID: k141_34552_41
Type: CAZyme
Location: 50275 - 52596 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34552_34 vegetarian > omnivore 1.24423 0.00085
k141_34552_35 vegetarian > omnivore 1.34272 0.00085
k141_34552_36 vegetarian > omnivore 1.06315 0.00085
k141_34552_37 vegetarian > omnivore 1.27033 0.00085

🧭 Explore Read Mapping of CGC

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