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Cluster: CGMR073586_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34552 k141_34552_19 16025 16978 + GT2
CAZyme k141_34552 k141_34552_20 17362 18567 + GT4
CAZyme k141_34552 k141_34552_21 18578 19336 + GT2
TC k141_34552 k141_34552_22 19362 21881 + 9.B.144.1.4
CAZyme k141_34552 k141_34552_23 22016 23014 - GT2
pfam k141_34552 k141_34552_24 23017 23790 - TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam k141_34552 k141_34552_25 23856 25229 - AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N
TC k141_34552 k141_34552_26 25520 27175 - 4.C.1.1.7
Gene ID: k141_34552_19
Type: CAZyme
Location: 16025 - 16978 (+)
Gene ID: k141_34552_20
Type: CAZyme
Location: 17362 - 18567 (+)
Gene ID: k141_34552_21
Type: CAZyme
Location: 18578 - 19336 (+)
Gene ID: k141_34552_22
Type: TC
Location: 19362 - 21881 (+)
Gene ID: k141_34552_23
Type: CAZyme
Location: 22016 - 23014 (-)
Gene ID: k141_34552_24
Type: pfam
Location: 23017 - 23790 (-)
Gene ID: k141_34552_25
Type: pfam
Location: 23856 - 25229 (-)
Gene ID: k141_34552_26
Type: TC
Location: 25520 - 27175 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34552_20 vegetarian > vegan 1.70484 0.00665

🧭 Explore Read Mapping of CGC

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