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Cluster: CGMR073586_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30442 k141_30442_2 2494 4434 + GH133
CAZyme k141_30442 k141_30442_3 4431 5717 + GT4
CAZyme k141_30442 k141_30442_4 5735 7042 + GH57
pfam k141_30442 k141_30442_5 7131 8516 - DUF4270
CAZyme k141_30442 k141_30442_6 8527 9396 - GT5
pfam k141_30442 k141_30442_7 9445 10284 + Pantoate_ligase
pfam k141_30442 k141_30442_8 10487 10837 + Asp_decarbox
TC k141_30442 k141_30442_9 10944 12266 + 2.A.66.1.28
STP k141_30442 k141_30442_10 12402 13127 + FHA
TC k141_30442 k141_30442_11 13144 14436 + 9.B.106.3.3
Gene ID: k141_30442_2
Type: CAZyme
Location: 2494 - 4434 (+)
Gene ID: k141_30442_3
Type: CAZyme
Location: 4431 - 5717 (+)
Gene ID: k141_30442_4
Type: CAZyme
Location: 5735 - 7042 (+)
Gene ID: k141_30442_5
Type: pfam
Location: 7131 - 8516 (-)
Gene ID: k141_30442_6
Type: CAZyme
Location: 8527 - 9396 (-)
Gene ID: k141_30442_7
Type: pfam
Location: 9445 - 10284 (+)
Gene ID: k141_30442_8
Type: pfam
Location: 10487 - 10837 (+)
Gene ID: k141_30442_9
Type: TC
Location: 10944 - 12266 (+)
Gene ID: k141_30442_10
Type: STP
Location: 12402 - 13127 (+)
Gene ID: k141_30442_11
Type: TC
Location: 13144 - 14436 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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