Cluster: CGMR073586_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR073586
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_87552 | k141_87552_25 | 33392 | 36739 | + | 1.B.14.6.1 |
| pfam | k141_87552 | k141_87552_26 | 36763 | 38430 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_87552 | k141_87552_27 | 38525 | 40009 | + | Trehalase |
| CAZyme | k141_87552 | k141_87552_28 | 39993 | 42872 | + | GH2 |
Gene ID: k141_87552_25
Type: TC
Location: 33392 - 36739 (+)
Type: TC
Location: 33392 - 36739 (+)
Gene ID: k141_87552_26
Type: pfam
Location: 36763 - 38430 (+)
Type: pfam
Location: 36763 - 38430 (+)
Gene ID: k141_87552_27
Type: pfam
Location: 38525 - 40009 (+)
Type: pfam
Location: 38525 - 40009 (+)
Gene ID: k141_87552_28
Type: CAZyme
Location: 39993 - 42872 (+)
Type: CAZyme
Location: 39993 - 42872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_87552_27 | vegetarian > omnivore | 1.02549 | 0.00085 |