Cluster: CGMR067574_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067574
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1001101 | k141_1001101_1 | 3 | 506 | + | GH88 |
| sulfatase | k141_1001101 | k141_1001101_2 | 611 | 1711 | + | S1_7 |
| pfam | k141_1001101 | k141_1001101_3 | 1718 | 2680 | + | PMI_typeI_cat | MPI_cupin_dom |
| TC | k141_1001101 | k141_1001101_4 | 2716 | 3867 | + | 2.A.1.7.16 |
| pfam | k141_1001101 | k141_1001101_5 | 3938 | 5431 | - | PTR2 | PTR2 | MFS_1 |
| CAZyme | k141_1001101 | k141_1001101_6 | 5524 | 7230 | + | GH13_8 |
Gene ID: k141_1001101_1
Type: CAZyme
Location: 3 - 506 (+)
Type: CAZyme
Location: 3 - 506 (+)
Gene ID: k141_1001101_2
Type: sulfatase
Location: 611 - 1711 (+)
Type: sulfatase
Location: 611 - 1711 (+)
Gene ID: k141_1001101_3
Type: pfam
Location: 1718 - 2680 (+)
Type: pfam
Location: 1718 - 2680 (+)
Gene ID: k141_1001101_4
Type: TC
Location: 2716 - 3867 (+)
Type: TC
Location: 2716 - 3867 (+)
Gene ID: k141_1001101_5
Type: pfam
Location: 3938 - 5431 (-)
Type: pfam
Location: 3938 - 5431 (-)
Gene ID: k141_1001101_6
Type: CAZyme
Location: 5524 - 7230 (+)
Type: CAZyme
Location: 5524 - 7230 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.