Cluster: CGMR067574_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067574
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1447612 | k141_1447612_2 | 430 | 1056 | + | 3.D.6.1.2 |
| TC | k141_1447612 | k141_1447612_3 | 1059 | 1637 | + | 3.D.6.1.2 |
| pfam | k141_1447612 | k141_1447612_4 | 1825 | 2097 | - | DivIC |
| STP | k141_1447612 | k141_1447612_5 | 2097 | 2639 | - | Pribosyltran |
| CAZyme | k141_1447612 | k141_1447612_6 | 2849 | 4663 | + | PL35 |
Gene ID: k141_1447612_2
Type: TC
Location: 430 - 1056 (+)
Type: TC
Location: 430 - 1056 (+)
Gene ID: k141_1447612_3
Type: TC
Location: 1059 - 1637 (+)
Type: TC
Location: 1059 - 1637 (+)
Gene ID: k141_1447612_4
Type: pfam
Location: 1825 - 2097 (-)
Type: pfam
Location: 1825 - 2097 (-)
Gene ID: k141_1447612_5
Type: STP
Location: 2097 - 2639 (-)
Type: STP
Location: 2097 - 2639 (-)
Gene ID: k141_1447612_6
Type: CAZyme
Location: 2849 - 4663 (+)
Type: CAZyme
Location: 2849 - 4663 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_1447612_3 | vegetarian > omnivore | 1.32239 | 0.02258 |