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Cluster: CGMR065917_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53085 k141_53085_106 109120 109770 + 1.A.8.13.3
pfam k141_53085 k141_53085_107 109982 111718 - ABC1
TC k141_53085 k141_53085_108 112214 113605 + 2.A.26.1.9
TC k141_53085 k141_53085_109 113749 115695 - 2.A.2.2.2
CAZyme k141_53085 k141_53085_110 115714 117765 - GH42
TF k141_53085 k141_53085_111 118012 119022 + LacI
CAZyme k141_53085 k141_53085_112 119117 121069 - GH78
pfam k141_53085 k141_53085_113 121152 122432 - Sugar_tr | MFS_1
CAZyme k141_53085 k141_53085_114 122447 124024 - GH78
Gene ID: k141_53085_106
Type: TC
Location: 109120 - 109770 (+)
Gene ID: k141_53085_107
Type: pfam
Location: 109982 - 111718 (-)
Gene ID: k141_53085_108
Type: TC
Location: 112214 - 113605 (+)
Gene ID: k141_53085_109
Type: TC
Location: 113749 - 115695 (-)
Gene ID: k141_53085_110
Type: CAZyme
Location: 115714 - 117765 (-)
Gene ID: k141_53085_111
Type: TF
Location: 118012 - 119022 (+)
Gene ID: k141_53085_112
Type: CAZyme
Location: 119117 - 121069 (-)
Gene ID: k141_53085_113
Type: pfam
Location: 121152 - 122432 (-)
Gene ID: k141_53085_114
Type: CAZyme
Location: 122447 - 124024 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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