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Cluster: CGMR065917_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_271086 k141_271086_1 591 1094 - 3.A.1.28.2
pfam k141_271086 k141_271086_2 1241 2497 - tRNA-synt_1b | S4 | SYY_C-terminal
NULL(UNKNOWN) k141_271086 k141_271086_3 2922 3587 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_271086 k141_271086_4 3687 4988 - GH25
pfam k141_271086 k141_271086_5 5460 6230 - Peptidase_C70 | Peptidase_C39_2
pfam k141_271086 k141_271086_6 6816 7319 + DUF1694
TC k141_271086 k141_271086_7 8277 8954 - 9.B.120.1.2
TF k141_271086 k141_271086_8 9050 9865 - MerR
TC k141_271086 k141_271086_9 10060 11358 - 2.A.23.1.2
pfam k141_271086 k141_271086_10 11742 12245 - DUF1440
pfam k141_271086 k141_271086_11 12418 13485 + FtsX
TC k141_271086 k141_271086_12 13500 14180 + 3.A.1.122.4
TC k141_271086 k141_271086_13 14408 14959 - 2.A.88.6.1
pfam k141_271086 k141_271086_14 14956 15936 - IU_nuc_hydro
pfam k141_271086 k141_271086_15 16357 16896 + RibD_C
TC k141_271086 k141_271086_16 16960 18126 - 2.A.37.2.1
NULL(UNKNOWN) k141_271086 k141_271086_17 18322 18999 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_271086 k141_271086_18 19068 19994 + 2.A.69.4.5
pfam k141_271086 k141_271086_19 20257 21657 - Lyase_1 | FumaraseC_C
TC k141_271086 k141_271086_20 22715 23902 - 2.A.1.36.3
pfam k141_271086 k141_271086_21 24021 24683 - Hydrolase | HAD_2
TC k141_271086 k141_271086_22 24897 25163 + 2.A.1.3.39
TC k141_271086 k141_271086_23 25173 26381 + 2.A.1.3.61
pfam k141_271086 k141_271086_24 26378 26878 + DUF4811
pfam k141_271086 k141_271086_25 26937 27482 - Acetyltransf_1 | Acetyltransf_3
TC k141_271086 k141_271086_26 27572 28582 - 2.A.98.1.4
TF k141_271086 k141_271086_27 28699 29526 + HTH_1
CAZyme k141_271086 k141_271086_28 29611 31119 - GT4
CAZyme k141_271086 k141_271086_29 31116 32660 - GT4
Gene ID: k141_271086_1
Type: TC
Location: 591 - 1094 (-)
Gene ID: k141_271086_2
Type: pfam
Location: 1241 - 2497 (-)
Gene ID: k141_271086_3
Type:
Location: 2922 - 3587 (-)
Gene ID: k141_271086_4
Type: CAZyme
Location: 3687 - 4988 (-)
Gene ID: k141_271086_5
Type: pfam
Location: 5460 - 6230 (-)
Gene ID: k141_271086_6
Type: pfam
Location: 6816 - 7319 (+)
Gene ID: k141_271086_7
Type: TC
Location: 8277 - 8954 (-)
Gene ID: k141_271086_8
Type: TF
Location: 9050 - 9865 (-)
Gene ID: k141_271086_9
Type: TC
Location: 10060 - 11358 (-)
Gene ID: k141_271086_10
Type: pfam
Location: 11742 - 12245 (-)
Gene ID: k141_271086_11
Type: pfam
Location: 12418 - 13485 (+)
Gene ID: k141_271086_12
Type: TC
Location: 13500 - 14180 (+)
Gene ID: k141_271086_13
Type: TC
Location: 14408 - 14959 (-)
Gene ID: k141_271086_14
Type: pfam
Location: 14956 - 15936 (-)
Gene ID: k141_271086_15
Type: pfam
Location: 16357 - 16896 (+)
Gene ID: k141_271086_16
Type: TC
Location: 16960 - 18126 (-)
Gene ID: k141_271086_17
Type:
Location: 18322 - 18999 (+)
Gene ID: k141_271086_18
Type: TC
Location: 19068 - 19994 (+)
Gene ID: k141_271086_19
Type: pfam
Location: 20257 - 21657 (-)
Gene ID: k141_271086_20
Type: TC
Location: 22715 - 23902 (-)
Gene ID: k141_271086_21
Type: pfam
Location: 24021 - 24683 (-)
Gene ID: k141_271086_22
Type: TC
Location: 24897 - 25163 (+)
Gene ID: k141_271086_23
Type: TC
Location: 25173 - 26381 (+)
Gene ID: k141_271086_24
Type: pfam
Location: 26378 - 26878 (+)
Gene ID: k141_271086_25
Type: pfam
Location: 26937 - 27482 (-)
Gene ID: k141_271086_26
Type: TC
Location: 27572 - 28582 (-)
Gene ID: k141_271086_27
Type: TF
Location: 28699 - 29526 (+)
Gene ID: k141_271086_28
Type: CAZyme
Location: 29611 - 31119 (-)
Gene ID: k141_271086_29
Type: CAZyme
Location: 31116 - 32660 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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