Cluster: CGMR065214_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: CGMR065214
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4021 | k141_4021_74 | 72726 | 73580 | - | 3.A.1.1.27 |
| TC | k141_4021 | k141_4021_75 | 73582 | 74931 | - | 3.A.1.1.27 |
| STP | k141_4021 | k141_4021_76 | 75003 | 76238 | - | SBP_bac_1 |
| CAZyme | k141_4021 | k141_4021_77 | 76492 | 78246 | + | CBM34 | GH13_20 |
| CAZyme | k141_4021 | k141_4021_78 | 78501 | 80108 | + | GH13_31 |
| CAZyme | k141_4021 | k141_4021_79 | 80133 | 82397 | + | GH65 |
Gene ID: k141_4021_74
Type: TC
Location: 72726 - 73580 (-)
Type: TC
Location: 72726 - 73580 (-)
Gene ID: k141_4021_75
Type: TC
Location: 73582 - 74931 (-)
Type: TC
Location: 73582 - 74931 (-)
Gene ID: k141_4021_76
Type: STP
Location: 75003 - 76238 (-)
Type: STP
Location: 75003 - 76238 (-)
Gene ID: k141_4021_77
Type: CAZyme
Location: 76492 - 78246 (+)
Type: CAZyme
Location: 76492 - 78246 (+)
Gene ID: k141_4021_78
Type: CAZyme
Location: 78501 - 80108 (+)
Type: CAZyme
Location: 78501 - 80108 (+)
Gene ID: k141_4021_79
Type: CAZyme
Location: 80133 - 82397 (+)
Type: CAZyme
Location: 80133 - 82397 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus formosensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.