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Cluster: CGMR065214_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_259550 k141_259550_259 285856 288531 - 3.A.3.2.21
pfam k141_259550 k141_259550_260 288914 289255 - DUF2200
pfam k141_259550 k141_259550_261 289317 290201 - ROK
CAZyme k141_259550 k141_259550_262 290191 291570 - GH1
TF k141_259550 k141_259550_263 291583 292380 - HTH_6
CAZyme k141_259550 k141_259550_264 292390 295008 - GH38
TC k141_259550 k141_259550_265 295066 295518 - 4.A.2.1.8
TC k141_259550 k141_259550_266 295533 297026 - 4.A.2.1.6
TC k141_259550 k141_259550_267 297221 297958 - 1.A.8.2.6
Gene ID: k141_259550_259
Type: TC
Location: 285856 - 288531 (-)
Gene ID: k141_259550_260
Type: pfam
Location: 288914 - 289255 (-)
Gene ID: k141_259550_261
Type: pfam
Location: 289317 - 290201 (-)
Gene ID: k141_259550_262
Type: CAZyme
Location: 290191 - 291570 (-)
Gene ID: k141_259550_263
Type: TF
Location: 291583 - 292380 (-)
Gene ID: k141_259550_264
Type: CAZyme
Location: 292390 - 295008 (-)
Gene ID: k141_259550_265
Type: TC
Location: 295066 - 295518 (-)
Gene ID: k141_259550_266
Type: TC
Location: 295533 - 297026 (-)
Gene ID: k141_259550_267
Type: TC
Location: 297221 - 297958 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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