Cluster: CGMR065214_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR065214
- CGC Family ID: CGCFAM_00503
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_264821 | k141_264821_93 | 90090 | 92450 | - | GT4 |
| TC | k141_264821 | k141_264821_94 | 92480 | 93289 | - | 3.A.1.104.1 |
| CAZyme | k141_264821 | k141_264821_95 | 93289 | 94704 | - | CBM50 |
| TF | k141_264821 | k141_264821_96 | 94806 | 95012 | - | HTH_3 |
| TF | k141_264821 | k141_264821_97 | 95144 | 95497 | + | HTH_3 |
| TC | k141_264821 | k141_264821_98 | 95560 | 96336 | - | 1.A.1.17.2 |
Gene ID: k141_264821_93
Type: CAZyme
Location: 90090 - 92450 (-)
Type: CAZyme
Location: 90090 - 92450 (-)
Gene ID: k141_264821_94
Type: TC
Location: 92480 - 93289 (-)
Type: TC
Location: 92480 - 93289 (-)
Gene ID: k141_264821_95
Type: CAZyme
Location: 93289 - 94704 (-)
Type: CAZyme
Location: 93289 - 94704 (-)
Gene ID: k141_264821_96
Type: TF
Location: 94806 - 95012 (-)
Type: TF
Location: 94806 - 95012 (-)
Gene ID: k141_264821_97
Type: TF
Location: 95144 - 95497 (+)
Type: TF
Location: 95144 - 95497 (+)
Gene ID: k141_264821_98
Type: TC
Location: 95560 - 96336 (-)
Type: TC
Location: 95560 - 96336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus formosensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.