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Cluster: CGMR065214_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_259550 k141_259550_20 20697 21272 + 1.A.78.2.6
pfam k141_259550 k141_259550_21 21373 21792 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
pfam k141_259550 k141_259550_22 21829 23304 - Amidase
TC k141_259550 k141_259550_23 23291 24139 - 3.A.1.3.13
pfam k141_259550 k141_259550_24 24283 24729 + OsmC
pfam k141_259550 k141_259550_25 24840 27101 + GARS_A | Glu_cys_ligase | ATP-grasp_6
TC k141_259550 k141_259550_26 27300 28466 + 2.A.1.2.8
TC k141_259550 k141_259550_27 28514 29044 - 9.B.36.1.3
TF k141_259550 k141_259550_28 29191 29631 + Rrf2
pfam k141_259550 k141_259550_29 29721 30350 + NAD_binding_10
TC k141_259550 k141_259550_30 30510 33113 + 3.A.9.1.2
pfam k141_259550 k141_259550_31 33255 33671 + NDK
TC k141_259550 k141_259550_32 33789 35006 + 2.A.1.2.5
pfam k141_259550 k141_259550_33 35135 35866 + Ubie_methyltran | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_259550 k141_259550_34 35980 37929 + 2.A.36.3.2
NULL(UNKNOWN) k141_259550 k141_259550_35 38062 38577 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_259550 k141_259550_36 38673 39371 + AIM24
TC k141_259550 k141_259550_37 39407 40963 - 2.A.55.2.6
TF k141_259550 k141_259550_38 41035 41730 - Fe_dep_repress
TF k141_259550 k141_259550_39 41873 42586 - GntR
TC k141_259550 k141_259550_40 42764 44104 + 4.A.3.2.8
CAZyme k141_259550 k141_259550_41 44135 46759 + GH38
CAZyme k141_259550 k141_259550_42 46776 48056 + GH125
CAZyme k141_259550 k141_259550_43 48092 49264 + GH18
CAZyme k141_259550 k141_259550_44 49388 50821 + GH1
Gene ID: k141_259550_20
Type: TC
Location: 20697 - 21272 (+)
Gene ID: k141_259550_21
Type: pfam
Location: 21373 - 21792 (+)
Gene ID: k141_259550_22
Type: pfam
Location: 21829 - 23304 (-)
Gene ID: k141_259550_23
Type: TC
Location: 23291 - 24139 (-)
Gene ID: k141_259550_24
Type: pfam
Location: 24283 - 24729 (+)
Gene ID: k141_259550_25
Type: pfam
Location: 24840 - 27101 (+)
Gene ID: k141_259550_26
Type: TC
Location: 27300 - 28466 (+)
Gene ID: k141_259550_27
Type: TC
Location: 28514 - 29044 (-)
Gene ID: k141_259550_28
Type: TF
Location: 29191 - 29631 (+)
Gene ID: k141_259550_29
Type: pfam
Location: 29721 - 30350 (+)
Gene ID: k141_259550_30
Type: TC
Location: 30510 - 33113 (+)
Gene ID: k141_259550_31
Type: pfam
Location: 33255 - 33671 (+)
Gene ID: k141_259550_32
Type: TC
Location: 33789 - 35006 (+)
Gene ID: k141_259550_33
Type: pfam
Location: 35135 - 35866 (+)
Gene ID: k141_259550_34
Type: TC
Location: 35980 - 37929 (+)
Gene ID: k141_259550_35
Type:
Location: 38062 - 38577 (+)
Gene ID: k141_259550_36
Type: pfam
Location: 38673 - 39371 (+)
Gene ID: k141_259550_37
Type: TC
Location: 39407 - 40963 (-)
Gene ID: k141_259550_38
Type: TF
Location: 41035 - 41730 (-)
Gene ID: k141_259550_39
Type: TF
Location: 41873 - 42586 (-)
Gene ID: k141_259550_40
Type: TC
Location: 42764 - 44104 (+)
Gene ID: k141_259550_41
Type: CAZyme
Location: 44135 - 46759 (+)
Gene ID: k141_259550_42
Type: CAZyme
Location: 46776 - 48056 (+)
Gene ID: k141_259550_43
Type: CAZyme
Location: 48092 - 49264 (+)
Gene ID: k141_259550_44
Type: CAZyme
Location: 49388 - 50821 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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