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Cluster: CGMR065214_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_144478 k141_144478_260 273547 273927 + 1.A.22.1.8
TC k141_144478 k141_144478_261 273966 275243 - 2.A.66.1.34
pfam k141_144478 k141_144478_262 275290 275850 - KOW | NusG
pfam k141_144478 k141_144478_263 275959 276156 - SecE
TC k141_144478 k141_144478_264 276353 278188 - 9.B.97.5.1
CAZyme k141_144478 k141_144478_265 278357 280639 - GT51
pfam k141_144478 k141_144478_266 280715 281584 + PseudoU_synth_2
TC k141_144478 k141_144478_267 281671 282516 - 3.A.1.15.3
pfam k141_144478 k141_144478_268 282752 283192 - ComGF
pfam k141_144478 k141_144478_269 283173 283577 - ComGE
TC k141_144478 k141_144478_270 283829 284134 - 3.A.14.1.2
TC k141_144478 k141_144478_271 284153 285172 - 3.A.14.1.2
TC k141_144478 k141_144478_272 285111 286055 - 3.A.14.1.1
pfam k141_144478 k141_144478_273 286242 286418 - Ribosomal_S21
STP k141_144478 k141_144478_274 286543 288024 - CBS | CBS
CAZyme k141_144478 k141_144478_275 288198 289802 + GH25
Gene ID: k141_144478_260
Type: TC
Location: 273547 - 273927 (+)
Gene ID: k141_144478_261
Type: TC
Location: 273966 - 275243 (-)
Gene ID: k141_144478_262
Type: pfam
Location: 275290 - 275850 (-)
Gene ID: k141_144478_263
Type: pfam
Location: 275959 - 276156 (-)
Gene ID: k141_144478_264
Type: TC
Location: 276353 - 278188 (-)
Gene ID: k141_144478_265
Type: CAZyme
Location: 278357 - 280639 (-)
Gene ID: k141_144478_266
Type: pfam
Location: 280715 - 281584 (+)
Gene ID: k141_144478_267
Type: TC
Location: 281671 - 282516 (-)
Gene ID: k141_144478_268
Type: pfam
Location: 282752 - 283192 (-)
Gene ID: k141_144478_269
Type: pfam
Location: 283173 - 283577 (-)
Gene ID: k141_144478_270
Type: TC
Location: 283829 - 284134 (-)
Gene ID: k141_144478_271
Type: TC
Location: 284153 - 285172 (-)
Gene ID: k141_144478_272
Type: TC
Location: 285111 - 286055 (-)
Gene ID: k141_144478_273
Type: pfam
Location: 286242 - 286418 (-)
Gene ID: k141_144478_274
Type: STP
Location: 286543 - 288024 (-)
Gene ID: k141_144478_275
Type: CAZyme
Location: 288198 - 289802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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