Cluster: CGMR065214_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR065214
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_254306 | k141_254306_68 | 73098 | 74039 | + | 3.A.1.14.11 |
| TC | k141_254306 | k141_254306_69 | 74017 | 75036 | + | 3.A.1.14.5 |
| TC | k141_254306 | k141_254306_70 | 75038 | 75814 | + | 3.A.1.14.7 |
| pfam | k141_254306 | k141_254306_71 | 76075 | 76908 | + | LicD |
| CAZyme | k141_254306 | k141_254306_72 | 76901 | 77851 | + | GT2 |
| NULL(UNKNOWN) | k141_254306 | k141_254306_73 | 77866 | 79119 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_254306 | k141_254306_74 | 79169 | 80689 | - | 2.A.66.1.40 |
Gene ID: k141_254306_68
Type: TC
Location: 73098 - 74039 (+)
Type: TC
Location: 73098 - 74039 (+)
Gene ID: k141_254306_69
Type: TC
Location: 74017 - 75036 (+)
Type: TC
Location: 74017 - 75036 (+)
Gene ID: k141_254306_70
Type: TC
Location: 75038 - 75814 (+)
Type: TC
Location: 75038 - 75814 (+)
Gene ID: k141_254306_71
Type: pfam
Location: 76075 - 76908 (+)
Type: pfam
Location: 76075 - 76908 (+)
Gene ID: k141_254306_72
Type: CAZyme
Location: 76901 - 77851 (+)
Type: CAZyme
Location: 76901 - 77851 (+)
Gene ID: k141_254306_73
Type:
Location: 77866 - 79119 (+)
Type:
Location: 77866 - 79119 (+)
Gene ID: k141_254306_74
Type: TC
Location: 79169 - 80689 (-)
Type: TC
Location: 79169 - 80689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus formosensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.