Cluster: CGMR065214_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR065214
- CGC Family ID: CGCFAM_08824
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_254306 | k141_254306_23 | 24751 | 26676 | + | 4.A.1.2.6 |
| CAZyme | k141_254306 | k141_254306_24 | 26691 | 28136 | + | GH1 |
| CAZyme | k141_254306 | k141_254306_25 | 28138 | 29574 | + | GH1 |
| peptidase | k141_254306 | k141_254306_26 | 29634 | 30323 | - | S33.UPW |
| CAZyme | k141_254306 | k141_254306_27 | 30520 | 31995 | + | GH73 |
| TC | k141_254306 | k141_254306_28 | 32334 | 33788 | + | 3.A.1.121.1 |
Gene ID: k141_254306_23
Type: TC
Location: 24751 - 26676 (+)
Type: TC
Location: 24751 - 26676 (+)
Gene ID: k141_254306_24
Type: CAZyme
Location: 26691 - 28136 (+)
Type: CAZyme
Location: 26691 - 28136 (+)
Gene ID: k141_254306_25
Type: CAZyme
Location: 28138 - 29574 (+)
Type: CAZyme
Location: 28138 - 29574 (+)
Gene ID: k141_254306_26
Type: peptidase
Location: 29634 - 30323 (-)
Type: peptidase
Location: 29634 - 30323 (-)
Gene ID: k141_254306_27
Type: CAZyme
Location: 30520 - 31995 (+)
Type: CAZyme
Location: 30520 - 31995 (+)
Gene ID: k141_254306_28
Type: TC
Location: 32334 - 33788 (+)
Type: TC
Location: 32334 - 33788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus formosensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.