Cluster: CGMR062874_CGC95
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_01821
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_99427 | k141_99427_18 | 24408 | 26048 | - | PL1_2 |
| CAZyme | k141_99427 | k141_99427_19 | 26331 | 27950 | + | CE8 |
| CAZyme | k141_99427 | k141_99427_20 | 27972 | 30452 | + | GH95 |
| TC | k141_99427 | k141_99427_21 | 30495 | 33815 | + | 1.B.14.6.1 |
| sulfatase | k141_99427 | k141_99427_22 | 33826 | 35901 | + | S1_27 |
| pfam | k141_99427 | k141_99427_23 | 35918 | 37591 | + | DUF4957 | DUF5123 |
| CAZyme | k141_99427 | k141_99427_24 | 37624 | 38928 | + | CE8 |
| TF | k141_99427 | k141_99427_25 | 39033 | 43424 | - | HTH_AraC |
| CAZyme | k141_99427 | k141_99427_26 | 43636 | 45186 | + | GH28 |
| TC | k141_99427 | k141_99427_27 | 45290 | 46945 | - | 2.A.1.42.2 |
Gene ID: k141_99427_18
Type: CAZyme
Location: 24408 - 26048 (-)
Type: CAZyme
Location: 24408 - 26048 (-)
Gene ID: k141_99427_19
Type: CAZyme
Location: 26331 - 27950 (+)
Type: CAZyme
Location: 26331 - 27950 (+)
Gene ID: k141_99427_20
Type: CAZyme
Location: 27972 - 30452 (+)
Type: CAZyme
Location: 27972 - 30452 (+)
Gene ID: k141_99427_21
Type: TC
Location: 30495 - 33815 (+)
Type: TC
Location: 30495 - 33815 (+)
Gene ID: k141_99427_22
Type: sulfatase
Location: 33826 - 35901 (+)
Type: sulfatase
Location: 33826 - 35901 (+)
Gene ID: k141_99427_23
Type: pfam
Location: 35918 - 37591 (+)
Type: pfam
Location: 35918 - 37591 (+)
Gene ID: k141_99427_24
Type: CAZyme
Location: 37624 - 38928 (+)
Type: CAZyme
Location: 37624 - 38928 (+)
Gene ID: k141_99427_25
Type: TF
Location: 39033 - 43424 (-)
Type: TF
Location: 39033 - 43424 (-)
Gene ID: k141_99427_26
Type: CAZyme
Location: 43636 - 45186 (+)
Type: CAZyme
Location: 43636 - 45186 (+)
Gene ID: k141_99427_27
Type: TC
Location: 45290 - 46945 (-)
Type: TC
Location: 45290 - 46945 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_99427_18 | vegan > omnivore | 1.70438 | 0.00029 |
| k141_99427_19 | vegan > omnivore | 2.73927 | 0.00029 |
| k141_99427_19 | vegetarian > omnivore | 1.06020 | 0.00993 |
| k141_99427_20 | vegan > omnivore | 2.04733 | 0.00029 |
| k141_99427_21 | vegan > omnivore | 2.67083 | 0.00029 |
| k141_99427_21 | vegetarian > omnivore | 1.05599 | 0.00993 |
| k141_99427_22 | vegan > omnivore | 2.22465 | 0.00029 |
| k141_99427_22 | vegetarian > omnivore | 2.35086 | 0.00717 |
| k141_99427_23 | vegan > omnivore | 2.83677 | 0.00029 |
| k141_99427_23 | vegetarian > omnivore | 2.71755 | 0.00717 |
| k141_99427_24 | vegan > omnivore | 2.54642 | 0.00029 |
| k141_99427_24 | vegetarian > omnivore | 2.33587 | 0.00993 |
| k141_99427_25 | vegan > omnivore | 2.84908 | 0.00029 |
| k141_99427_25 | vegetarian > omnivore | 2.34510 | 0.00717 |
| k141_99427_26 | vegan > omnivore | 2.71485 | 0.00029 |
| k141_99427_26 | vegetarian > omnivore | 1.29932 | 0.00993 |