Cluster: CGMR062874_CGC90
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062874
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_119445 | k141_119445_11 | 11734 | 12147 | - | CBM35 |
| CAZyme | k141_119445 | k141_119445_12 | 12153 | 13520 | - | GH27 |
| pfam | k141_119445 | k141_119445_13 | 13552 | 15114 | - | BT_3987-like_N |
| TC | k141_119445 | k141_119445_14 | 15133 | 15858 | - | 8.A.46.1.5 |
Gene ID: k141_119445_11
Type: CAZyme
Location: 11734 - 12147 (-)
Type: CAZyme
Location: 11734 - 12147 (-)
Gene ID: k141_119445_12
Type: CAZyme
Location: 12153 - 13520 (-)
Type: CAZyme
Location: 12153 - 13520 (-)
Gene ID: k141_119445_13
Type: pfam
Location: 13552 - 15114 (-)
Type: pfam
Location: 13552 - 15114 (-)
Gene ID: k141_119445_14
Type: TC
Location: 15133 - 15858 (-)
Type: TC
Location: 15133 - 15858 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_119445_11 | vegan > omnivore | 1.95137 | 0.00029 |
| k141_119445_12 | vegan > omnivore | 1.87885 | 0.00029 |
| k141_119445_13 | vegan > omnivore | 1.75800 | 0.00029 |
| k141_119445_14 | vegan > omnivore | 2.16821 | 0.00029 |