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Cluster: CGMR062874_CGC84

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34312 k141_34312_38 52134 53711 + 9.B.174.1.1
NULL(UNKNOWN) k141_34312 k141_34312_39 53909 54253 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_34312 k141_34312_40 55019 55657 + Bac_DNA_binding | HU-HIG
CAZyme k141_34312 k141_34312_41 55830 57404 - GH30_4
CAZyme k141_34312 k141_34312_42 57473 59122 - GH30_4
TC k141_34312 k141_34312_43 59152 60741 - 8.A.46.1.5
TC k141_34312 k141_34312_44 60764 63799 - 1.B.14.6.1
NULL(UNKNOWN) k141_34312 k141_34312_45 63817 65268 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_34312 k141_34312_46 65486 69604 + HTH_AraC
CAZyme k141_34312 k141_34312_47 69787 70749 - GH18
Gene ID: k141_34312_38
Type: TC
Location: 52134 - 53711 (+)
Gene ID: k141_34312_39
Type:
Location: 53909 - 54253 (-)
Gene ID: k141_34312_40
Type: pfam
Location: 55019 - 55657 (+)
Gene ID: k141_34312_41
Type: CAZyme
Location: 55830 - 57404 (-)
Gene ID: k141_34312_42
Type: CAZyme
Location: 57473 - 59122 (-)
Gene ID: k141_34312_43
Type: TC
Location: 59152 - 60741 (-)
Gene ID: k141_34312_44
Type: TC
Location: 60764 - 63799 (-)
Gene ID: k141_34312_45
Type:
Location: 63817 - 65268 (-)
Gene ID: k141_34312_46
Type: TF
Location: 65486 - 69604 (+)
Gene ID: k141_34312_47
Type: CAZyme
Location: 69787 - 70749 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34312_39 vegan > omnivore 2.63121 0.00029
k141_34312_39 vegetarian > omnivore 2.34155 0.00993

🧭 Explore Read Mapping of CGC

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